BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018G04SP1|AL427369
(636 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 803 0.0
>3x_Contig1783
Length = 22123
Score = 803 bits (403), Expect = 0.0
Identities = 459/471 (97%), Gaps = 6/471 (1%)
Strand = Plus / Plus
Query: 12 accttacgcaatt-tgatcsattcaccattcccagatagaagaccaatgctaattcaagc 70
||||||||||| | || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 17752 accttacgcaagtgtggtccattcaccattcccagatagaagaccaatgctaattcaagc 17811
Query: 71 ggttcctaccatgatctacgctgccctcacagttatgatggcaactatacttttccccaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17812 ggttcctaccatgatctacgctgccctcacagttatgatggcaactatacttttccccaa 17871
Query: 131 gaatcatttcacaagtgcgaagaatctatctttctttttcggatccttcagtattgttgt 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17872 gaatcatttcacaagtgcgaagaatctatctttctttttcggatccttcagtattgttgt 17931
Query: 191 cttatgcacacatttcgtatttaagaggggtattcaatatgtgaactggccaaagttagt 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17932 cttatgcacacatttcgtatttaagaggggtattcaatatgtgaactggccaaagttagt 17991
Query: 251 cgatttagaggtatttgattgcatgaacacacgcataacaaggagaaacaatatcaaagg 310
|||||||| ||||||||||||| ||| ||||||||||||||||||||||||| |||||||
Sbjct: 17992 cgatttag-ggtatttgattgc-tgagcacacgcataacaaggagaaacaat-tcaaagg 18048
Query: 311 tgttagatacagttcctgataccaaagttcgttaaaccaaattccttcaagagggactaa 370
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 18049 tgttagatac-gttcctgat-ccaaagttcgttaaaccaaattccttcaagagggactag 18106
Query: 371 cattgaacattccttaatgtatagagctttcattttcatgtttatttactccatgacgtt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18107 cattgaacattccttaatgtatagagctttcattttcatgtttatttactccatgacgtt 18166
Query: 431 tctacttttatracttcttcttcccagttttaatgttcgataccttttgaa 481
||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 18167 tctacttttatgacttcttcttcccagttttaatgttcgataccttttgaa 18217
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5349
Number of Sequences: 1807
Number of extensions: 5349
Number of successful extensions: 100
Number of sequences better than 1.0e-20: 1
length of query: 636
length of database: 10,358,551
effective HSP length: 16
effective length of query: 620
effective length of database: 10,329,639
effective search space: 6404376180
effective search space used: 6404376180
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)